BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B11LP1|AL428339
(911 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1077 1782 0.0
>3x_Contig1077
Length = 5094
Score = 1782 bits (899), Expect = 0.0
Identities = 908/911 (99%)
Strand = Plus / Plus
Query: 1 gtgtcttagatccatcgtgaaggtaacttcacctggaatgatattaacagagtatggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2384 gtgtcttagatccatcgtgaaggtaacttcacctggaatgatattaacagagtatggttt 2443
Query: 61 aacgtctataacaccggtggtaaacaaaccatcgtggctttcagcaatttccgcagcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2444 aacgtctataacaccggtggtaaacaaaccatcgtggctttcagcaatttccgcagcagc 2503
Query: 121 acagatcatcttcgaggtcatcaaaagagcatcctttctcaatctccaaggagtcgtacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2504 acagatcatcttcgaggtcatcaaaagagcatcctttctcaatctccaaggagtcgtacc 2563
Query: 181 tgcatgtgcaccaacacccgaaacggtgattttggaccaattgtatgcttggacccctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2564 tgcatgtgcaccaacacccgaaacggtgattttggaccaattgtatgcttggacccctgt 2623
Query: 241 aacaatacctatacgtctatcctcatcttccaggattggtccttgctcgatgtgcaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2624 aacaatacctatacgtctatcctcatcttccaggattggtccttgctcgatgtgcaattc 2683
Query: 301 gaaatgagcatctatttgattctcttgatacgatgctggaacgtctccaatgtaattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2684 gaaatgagcatctatttgattctcttgatacgatgctggaacgtctccaatgtaattaat 2743
Query: 361 tttggttaaggattctttaactgtctctggatgttcttcaccaattgacaccaagctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2744 tttggttaaggattctttaactgtctctggatgttcttcaccaattgacaccaagctgta 2803
Query: 421 agcatcctctaaggaaagatcgtgtgaccagacagaagacccagtacaagatctggcaaa 480
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2804 agcatcctctaaggaaagaacgtgtgaccagacagaagacccagtacaagacctggcaaa 2863
Query: 481 tctggcaccttcttcattgaaccaaacgacaacgcacacgtcataatttgggacgtaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2864 tctggcaccttcttcattgaaccaaacgacaacgcacacgtcataatttgggacgtaatt 2923
Query: 541 gttatctttgaacgttcttagaacttctaacccggctaagacacccaatataccatcgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2924 gttatctttgaacgttcttagaacttctaacccggctaagacacccaatataccatcgta 2983
Query: 601 tttaccagcttctggctgagtgtcgagatgcgagcctgtcgcagttggtttagtcccact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2984 tttaccagcttctggctgagtgtcgagatgcgagcctgtcgcagttggtttagtcccact 3043
Query: 661 gttcttacctggatatatggcgaaaatgttaccaatttggtcaattttaatggaacaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3044 gttcttacctggatatatggcgaaaatgttaccaatttggtcaattttaatggaacaacc 3103
Query: 721 aagatctttacattcacgaacaaaccaatctctcatcttaccgtctaattcggtccctgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3104 aagatctttacattcacgaacaaaccaatctctcatcttaccgtctaattcggtccctgc 3163
Query: 781 aagtctcctcataccaaattcgtgacgttcttcaccccatctggcaacacctccaaattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3164 aagtctcctcataccaaattcgtgacgttcttcaccccatctggcaacacctccaaattc 3223
Query: 841 gctgccggtagataagattgtatcgttcaatcttccaggagcaatctgcaaaggaacatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3224 gctgccggtagataagattgtatcgttcaatcttccaggagcaatctgcaaaggaacatg 3283
Query: 901 gccgacgagat 911
|||||||||||
Sbjct: 3284 gccgacgagat 3294
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5823
Number of Sequences: 1807
Number of extensions: 5823
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)